CDS

Accession Number TCMCG043C38025
gbkey CDS
Protein Id XP_022879432.1
Location join(12002583..12002613,12002790..12002903,12003972..12004116,12007173..12007255,12008329..12008518,12010472..12010616,12016529..12016652,12018285..12018385,12018558..12018689,12019543..12019623,12021823..12022010,12022351..12022420,12022907..12022966,12023075..12023113,12023213..12023301,12023404..12023468,12023695..12023741,12024126..12024185,12025152..12025223,12026862..12026891,12026980..12027074,12027233..12027338,12028486..12028548,12028651..12028722,12028896..12028970)
Gene LOC111397008
GeneID 111397008
Organism Olea europaea var. sylvestris

Protein

Length 758aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA417827
db_source XM_023023664.1
Definition U3 small nucleolar RNA-associated protein 25 isoform X1 [Olea europaea var. sylvestris]

EGGNOG-MAPPER Annotation

COG_category K
Description Utp25, U3 small nucleolar RNA-associated SSU processome protein 25
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGAAGCAAGGGTTTGCTCGTAAACAAGGGTTTAAGAGGCTGTCTAAAGCAGATACATTATCAAAGGAAGAAAATTTAAGACGAAATCGCCGTGCCAATGACGAAAAGTTCACACCAAGCTCCTCTCAGAGTGACGACTCAGGGGACTTGTTGGAGGAGCACAAAGATGTAGCTTCTGAAGATGAAGAATCAGGAAAAATTGTTTATAGAGAGCCAAGTATGTATGACAATTTGTTGAAGACATTGGGGTCTCGAAATGAAACTGTTGCCAATGCTTTGAGAAGAAGGCAAATAGAAGGGAAAAGTGACACAGATGAAGATGTAGTTGGGGATATCGAATCTTCTAGCGAGTCTGAGGAACAGCATGATGGTTCAGGAAATGATAAAGGGTCTCCCTGGAGTAACACTTTTGTGAAAGGATTAAAAGGTTCTGAAATGGTTGATGGTATGGAACTGTGTGAAGATGTTGTGATTGATGATGATGGACTATATGACACGGATGAAGAAAGTGATGTGAGAATGAGTGGTCAATCCATATCTGAGGCATCTGTGATCACAAGTACTTTTGCAAATCATTTGGATTACAAGTTGTCAAAAGAAGAGATTGACCACTTATTGATAAGGAAATGGAGCTATTCATGGAAGATGCCTGCTTTTAATATGTCAAAAACCTACTGGAGAGGAACAGGTGTATGCCCAGTTGAGGATTTGGACTTGGATTCACATTATGGTCTCAAGCCAAGGTTATACAAGCATTGGTTGGAAATGTACGATGCATCTAAAGGCAGCGAATTTCATAAATCTAAACAGAGATTGTTTTTCTCCATTTGCAACAGCTATCAAGATATAATGCACCATAACAAGAAGCCATTTTATCTCAAAGGTCAGGAAGAAGATTCAAGTATCATGGATGCTTACCTAGTGCATTCTGTGAATCATATTCTCAAAAGTAAAGATCTCATGACAAAAAATGAAAGGAAACTGGCTAAGAATCAAGATATTGTGGAGGATAAAATTCTTAACGGCAGTGCTTATCTCGACCGTGGGTTTACTCGTCCTAAGGTTTTGGTTCTTTTGCCTTTAGCAGGCATTGCACGACGGATTATTACGAGGTTGATCCAGTTGACTCCTTCCAAGAACAAGGCTGATGTGGAAAACATTGGACGCTTTAATGAGGAGTATGGTTCTGGAAGCACTGAAGACCAGTATGAAGAGGATGACTTAGAAATATCTAAATCTAAGAAGTCCACAAAACCTTCTGACTTCCAAGCATTGCTCGGTCGAGATAATAACAATGATCACTTCATGATAGGCATAAAGTTTACCAAGAAGAGTATGAGGTTGTATAGCGATTTCTATAGTTCAGATATGATTGTTGCTTCTCCCCTTGGTTTGTACACTAAAATTGGGAAGGCTGAAGATGGAAAGGAAGAAGATGTTGATTATCTTTCTTCTATTGAGATCTTAATCATTGACCACGCGGATGTCATGATGATGCAGAATTGGTCCCATGTGAAGACTGTTGTTGAACATTTGAACCAAATACCGTCTAAGCAGCATGGAACTGACATTATGCGCATAAGGCCGTGGTATCTAGATGGGCAAGCACGCTACTATCGGCAAACAATAATTTTAGGTTCTCACTTGAACCCAGACATCAATACACTGTTTAATCAGCAATGCTTTAACTACCAAGGAAAGGTAAAATTGGAATGCAGTTATAAAGGTGTTCTCCCAAAAATTATGCTTCAAGTACGGCAGATTTATGAGCGTTTTGATACAAAGTCAATATTGGAGGCTGATGATGATCGACTTGAATATTTTGCTAAAAAGGTGTTTCCCAAGATAAAAGATTCTGTCCAGCCTGGGGTTATGATATTCATTAGTTCGTACTTCGAGTTCGTTCGACTTCGAAATTTTTTGAAGTCACAGGGTGCATCCGTCTGCTTGTTTGGAGAGTACACTAAACAGAAGGATATATCCAGTGTACGAGGCCAGTTTTTTAGGGGAGAAAAGAAAATCATTCTTTATACTGAGAGAGCTCACTTCTATTATAGATATAAGATTCGCGGTGTTCAGAATTTAATTATCTACTCCCTTCCAGAGAGGAAAGAATTTTACCCAGAGATTGTTAGTTTTCTGGAAGAGTCTGATAACATGAACTGCACTGTCTTATTTTCTCGTCTCGACTATCTTCGGCTTGAGAGAATTGTTGGTTCTGCTGCTGCAAAAAGGATGGTCAGCTCAGAGAAAGGCATATTTGTTTTCGCTTAG
Protein:  
MGKQGFARKQGFKRLSKADTLSKEENLRRNRRANDEKFTPSSSQSDDSGDLLEEHKDVASEDEESGKIVYREPSMYDNLLKTLGSRNETVANALRRRQIEGKSDTDEDVVGDIESSSESEEQHDGSGNDKGSPWSNTFVKGLKGSEMVDGMELCEDVVIDDDGLYDTDEESDVRMSGQSISEASVITSTFANHLDYKLSKEEIDHLLIRKWSYSWKMPAFNMSKTYWRGTGVCPVEDLDLDSHYGLKPRLYKHWLEMYDASKGSEFHKSKQRLFFSICNSYQDIMHHNKKPFYLKGQEEDSSIMDAYLVHSVNHILKSKDLMTKNERKLAKNQDIVEDKILNGSAYLDRGFTRPKVLVLLPLAGIARRIITRLIQLTPSKNKADVENIGRFNEEYGSGSTEDQYEEDDLEISKSKKSTKPSDFQALLGRDNNNDHFMIGIKFTKKSMRLYSDFYSSDMIVASPLGLYTKIGKAEDGKEEDVDYLSSIEILIIDHADVMMMQNWSHVKTVVEHLNQIPSKQHGTDIMRIRPWYLDGQARYYRQTIILGSHLNPDINTLFNQQCFNYQGKVKLECSYKGVLPKIMLQVRQIYERFDTKSILEADDDRLEYFAKKVFPKIKDSVQPGVMIFISSYFEFVRLRNFLKSQGASVCLFGEYTKQKDISSVRGQFFRGEKKIILYTERAHFYYRYKIRGVQNLIIYSLPERKEFYPEIVSFLEESDNMNCTVLFSRLDYLRLERIVGSAAAKRMVSSEKGIFVFA